Publications
Selected publications are listed below. For a complete list, see my CV or Google Scholar profile. Code and pipelines are available on GitHub.
2026
- I.B. Torres Aguilar, Y. Liu, Z. Zhang [2026]. Short-to-Long Functional Connectivity Transfer via Structure-Aware Latent Diffusion. European Conference on Computer Vision (ECCV).
- G. Sargent, W.W. Sun, Z. Zhang, Y. Liu [2026]. Prediction-Powered Adaptive Inference with Pretrained AI Models for Contextual Bandits. International Conference on Machine Learning (ICML).
- M.R. Cole, Y. Xiang, W. Consagra, A. Srivastava, X. Qiu, Z. Zhang [2026]. ENCORE: Fast Geometric Framework for Aligning Brain Structural Connectivity on Cortical Manifolds. Medical Image Analysis.
- S. Gao, Z. Gu, S. Ding, G. Wang, Z. Zhang, H. Zhao, Y. Zhao [2026]. Brain Functional-Structural Gradient Coupling Reflects Development, Behavior and Genetic Influences. Nature Communications.
- Z. Zhang, A.H. Liu, Z. Zhang [2026]. BridgeBP: A Toolbox for Bridging Brain Parcellations and Standardizing Structural Connectivity Matrices. Aperture Neuro.
- Y. Xiang, M. Cole, Z. Zhang [2026]. Diffeomorphic Cortical Alignment via Direct Warping of Streamline Endpoints. arXiv preprint.
- T. Li, X. Wang, M. Cole, Z. Sun, Z. Jiang, X. Qian, S. Gao, T. Luo, M. Descoteaux, J.L. Stein, X. Wang, T.E. Nichols, H. Zhang, Z. Zhang, H. Zhu [2026]. Connectome-based Spatial Statistics Enabling Large-Scale Population Analyses of Human Connectome Across Cohorts. bioRxiv preprint.
- Y. Zhang, M. Liu, Z. Zhang [2026]. Attention-Based Variational Framework for Joint and Individual Components Learning with Applications in Brain Network Analysis. arXiv preprint.
2025
- A. Ackerman, Z. Zhang, J. Hannig, J. Prothero, J.S. Marron [2025]. Multifaceted Neuroimaging Data Integration via Analysis of Subspaces. Psychometrika.
- R. Liu, Z. Zhang, H. Won, S. Marron [2025]. Significance in Scale Space for Hi-C Data. Bioinformatics.
- M. Wu, S. Jing, P.T. Yap, Z. Zhang, M. Liu [2025]. Unpaired Volumetric Harmonization of Brain MRI with Conditional Latent Diffusion. Medical Image Analysis.
- L. Wang, D. Li, Z. Zhang [2025]. Riemannian Diffusion Kernel-Smoothed Continuous Structural Connectivity on Cortical Surface. Imaging Neuroscience.
- Z. Zhang, A. Venkataraman, M. Cole, T. Ye, D. Qiu, F.V. Lin, B.B. Risk [2025]. The Impact of Multiband and In-Plane Acceleration on White Matter Microstructure Analysis. Human Brain Mapping.
- W. Consagra, Z. Gu, Z. Zhang [2025]. NeuroPMD: Neural Fields for Density Estimation on Product Manifolds. Journal of Computational and Graphical Statistics.
- R. Yuan, M. Cole, J. Gewandter, J. Markman, Z. Zhang, P. Geha [2025]. Clinical Phenotype Matters: Structural and Functional Thalamic Changes in Neuropathic Low-Back Pain. PAIN.
- R. Norel, J. Gewandter, Z. Zhang, A. Tahsin, C.G. Abdallah, J. Markman, et al. [2025]. Turning Patients' Open-Ended Narratives of Chronic Pain Into Quantitative Measures: Natural Language Processing Study. JMIR Human Factors.
2024
- W. Dai, Z. Zhang, P. Song, H. Zhang, Y. Zhao [2024]. Heritability and genetic contribution analysis of structural-functional coupling in human brain. Imaging Neuroscience.
- A. Turnbull, F.V. Lin, Z. Zhang [2024]. Issues of parcellation in the calculation of structure–function coupling. Nature Reviews Neuroscience.
- Y. Zhang, M. Liu, Z. Zhang, D. Dunson [2024]. Motion-Invariant Variational Auto-Encoding of Brain Structural Connectomes. Imaging Neuroscience.
- A. Allen, Z. Zhang, A Nobel [2024]. CoCoNest: A Continuous Structural Connectivity-based Nested Parcellation of the Human Cerebral Cortex. Network Neuroscience.
- W. Consagra, M. Cole, X. Qiu and Z. Zhang [2024]. Continuous and Atlas-free Analysis of Brain Structural Connectivity. Annals of Applied Statistics.
2023
- A. Roy, Z. Lan, Z. Zhang [2023]. Nonparametric Modeling of Diffusion MRI Signal in Q-Space. Data Science in Science.
- L. L. Duan, Z. Yuwen, G. Michailidis, Z. Zhang [2023]. Low Tree-Rank Bayesian Vector Autoregression Models. Journal of Machine Learning Research.
- D. Li, P. Nguyen, Z. Zhang, D. Dunson [2023]. Tree Representations of Brain Structural Connectivity via Persistent Homology. Frontiers in Neuroscience, Brain Imaging Methods.
- Y. Zhao, C. Chang, J. Zhang, Z. Zhang [2023]. Genetic underpinnings of brain structural connectome for young adults. Journal of the American Statistical Association.
2022
- Y. Li, G. Mateos, Z. Zhang [2022]. Learning to Model the Relationship Between Brain Structural and Functional Connectomes. IEEE Transactions on Signal and Information Processing over Network.
- Z. Zhang, Y. Wu, D. Xiong, J. G. Ibrahim, A. Srivastava, H. Zhu. [2022]. LESA: Longitudinal Elastic Shape Analysis of Brain Subcortical Structures. Journal of the American Statistical Association JASA discussion paper
- P. Dey, Z. Zhang, D. Dunson. [2022]. Outlier Detection for Multi-Network Data. Bioinformatics.
- Z. Zhang, B. Saparbayeva. [2022]. Amplitude Mean of Functional Data on S2 and its Accurate Computation. Journal of Mathematical Imaging and Vision.
- Q. Chen, A. Turnbull, M. Cole, Z. Zhang, F. V. Lin. [2022]. Enhancing Cortical Network-Level participation Coefficient as a Potential Mechanism for Transfer in Cognitive Training in aMCI. NeuroImage.
- W. Consagra, A. Venkataraman, Z. Zhang. [2022]. Optimized Diffusion Imaging for Brain Structural Connectome Analysis. IEEE Transactions on Medical Imaging Runner-up, ASA Statistical Methods in Imaging Section paper competition
2021
- Z. Zhang, J. Gewandter, P. Geha. [2021]. Brain Imaging Biomarkers for Chronic Pain. Frontiers in Neurology.
- M. Liu Z. Zhang, D. Dunson. [2021]. Graph Auto-Encoding Brain Networks with Applications to Analyzing Large-Scale Brain Imaging Datasets. NeuroImage. 245, 118750.
- G. Papadogeorgou Z. Zhang, D. Dunson. [2021]. Soft Tensor Regression. Journal of Machine Learning Research. 22, 1-53.
- L. Wang, Z. Zhang. [2021]. Classification of Longitudinal Brain Networks with an Application to Understanding Superior Aging. Stat.
- M. Cole, K. Murray, E. St-Onge, B. Risk, J. Zhong, G. Schifitto, M. Descoteaux, Z. Zhang. [2021]. Surface-Based Connectivity Integration: An Atlas-Free Approach to Jointly Study Functional and Structural Connectivity. Human Brain Mapping.
- B. Risk, R. Murden, J. Wu, M. Nebel, A. Venkataraman, Z. Zhang, D. Qiu. [2021]. Which Multiband Factor Should You Choose for Your Resting-State fMRI Study? NeuroImage. 234, 117965.
- Z. Zhang, X. Wang, L. Kong, H. Zhu. [2021]. High-Dimensional Spatial Quantile Function-on-Scalar Regression. Journal of the American Statistical Association.
- L. Wang, F. Lin, M. Cole, Z. Zhang. [2021]. Learning Clique Subgraphs in Structural Brain Network Classification with Application to Crystallized Cognition. NeuroImage. 225, 117493.
- X. Wang, G. Zhu, J. Rhen, J. Pang, Z. Zhang. [2021]. Vessel Tech: A High-Accuracy Pipeline for Comprehensive Mouse Retinal Vasculature Characterization. Angiogenesis. 24, 7–11.
2019
- M. Dai, Z. Zhang, A. Srivastava. [2019]. Analyzing Dynamical Brain Functional Connectivity As Trajectories on Space of Covariance Matrices. IEEE Transactions on Medical Imaging. 39.3, 611-620.
- M. Dai, Z. Zhang, A. Srivastava. [2019]. Discovering Common Change-Point Patterns in Functional Connectivity Across Population. Medical Imaging Analysis. 58, 101532.
- Z. Zhang G. Allen, H. Zhu, D. Dunson. [2019]. Tensor Network Factorizations: Relationships Between Brain Structural Connectomes and Traits. NeuroImage. 197, 330-343.
- L. Wang, Z. Zhang, D. Dunson. [2019]. Symmetric Bilinear Regression for Signal Subgraph Estimation. IEEE Transactions on Signal Processing. 67.7, 1929-1940.
- L. Wang, Z. Zhang, D. Dunson. [2019]. Common and Individual Structure of Brain Networks. Annals of Applied Statistics. 13.1, 85-112.
- Z. Zhang, E. Klassen, A. Srivastava. [2019]. Robust Comparison of Kernel Densities on Spherical Domains. Sankhya A. 81.1,144-171.
- Z. Zhang, M. Descoteaux, D. Dunson. [2019]. Nonparametric Bayes Models of Fiber Curves Connecting Brain Regions.. Journal of the American Statistical Association. 114:528, 1505-1517.
2018
- Z. Zhang, J. Su, H. Le, E. Klassen, A. Srivastava. [2018]. Rate-Invariant Analysis of Covariance Trajectories. Journal of Mathematical Imaging and Vision. 60, 1306-1323.
- Z. Zhang, M. Descoteaux, J. Zhang, D. Dunson, A. Srivastava, H. Zhu. [2018]. Mapping Population-based Structural Connectome. NeuroImage. 172, 130-145.
- Z. Zhang, E. Klassen, A. Srivastava. [2018]. Phase-Amplitude Separation and Modeling of Spherical Trajectories. Journal of Computational and Graphical Statistics. 27.1, 85-97.
2015 and Earlier
- Z. Zhang, D. Pati, A. Srivastava. [2015]. Bayesian Clustering of Shapes of Curves. Journal of Statistical Planning and Inference. 166, 171-186.
- Z. Zhang, E. Klassen, A. Srivastava. [2013]. Gaussian Blurring-Invariant Comparison of Signals and Images. IEEE Transactions on Image Processing. 22.8, 3145-3157.
- Z. Zhang, E. Klassen, A. Srivastava, P.K. Turaga, R. Chellappa. [2011]. Blurring-Invariant Riemannian Metrics for Comparing Signals and Images. International Conference on Computer Vision (ICCV). Barcelona, Spain.